I’m unable to envisage how this is tied to Nucleus rather than my permissions manager but the console is being denied permissions from what I’d assume are vanilla commands and they’re being flagged as limited by Nucleus.
Short segment of the stacktrace:
23.12 10:43:58 [Server] Server thread/INFO [nucleus]: Server ran the command: /save-all
23.12 10:43:58 [Server] Server thread/INFO You do not have permission to use this command
23.12 10:43:58 [Server] Server thread/INFO [nucleus]: Server ran the command: /stop
23.12 10:43:58 [Server] Server thread/INFO You do not have permission to use this command!
Minecraft Version: 1.10.2
Sponge Version: SpongeForge 1.10.2-2171-5.1.0-BETA-1983
Sponge API Version: SpongeAPI 5.1.0-SNAPSHOT-323db46
Minecraft Coder Pack (mcp) version 9.19
Forge Mod Loader (FML) version 8.0.99.99
Minecraft Forge (Forge) version 12.18.2.2111
PermissionsEx (permissionsex) version 2.0-SNAPSHOT-b145
Nucleus Version: 0.16.2-5.0 (Git: 9a9c058)
Think this is all that’s relevant.
EDIT:
Oh, and maybe these:
Nucleus: Enabled Modules
admin, afk, back,ban, blacklist, chat, command-logger, connection, connection-messages, core
environment, fly, freeze-player, fun, home, ignore, info, inventory, item, jail, jump, kick, kit, mail, message, misc, mob, mute, nameban, nickname, note, playerinfo, powertool, rtp, rules, server-shop, sign, spawn, staff-chat, teleport, vanish, warn, warp, world
Nucleus: Disabled Modules
geo-ip